What the statewide pattern says
Glacial till keeps a lid on it — mostly
South Dakota's signal is thin because its dominant aquifer is heterogeneous glacial drift — median nitrate in its private wells is among the lowest measured nationally, with pockets of high readings in shallow oxidizing settings.
East of the Missouri River, South Dakota drinks from the glacial aquifer system — buried outwash and till left by the ice sheets. Nationally, USGS found that system runs low: median nitrate of just 0.11 mg/L in private wells, background under 1 mg/L, and fewer than 5 percent of private wells above the federal limit — though that small group included some of the highest nitrate ever measured by the national program, up to 77 mg/L (USGS Scientific Investigations Report 2010-5100).
The glacial drift’s heterogeneity is the control. Thick, fine-grained, reducing till strips nitrate; shallow, oxidizing sand-and-gravel windows let it through. Mapping the whole glacial system, USGS estimated high nitrate in about 4 percent of its area, concentrated where groundwater stays oxidizing and nitrogen sources sit close (Erickson and others, 2019). South Dakota’s mid-band counties — Pennington, Brookings, Gregory, Moody — mark such windows rather than any regional driver.
West of the river the state shifts to bedrock aquifers — the Minnelusa and Madison in the Black Hills, the Dakota and Niobrara elsewhere — whose nitrate typically runs low where wells are deep and well-sealed; the state literature treats high readings there as local surface leakage rather than a regional pattern.
The supported source reading is local agricultural nitrogen entering shallow oxidizing windows in the glacial drift — not a certified source at any individual system, and in South Dakota a genuinely small pattern (Nolan and Hitt, 2006).